[She closes her eyes and tries to focus, a faint purple glow rising up around her.]

When you go, turn over the bomb and anything else they might see as evidence against her, and let them know that you are willing to act as a witness against your scary former boss in return for protection. Emphasize the scary part. There will be whatever the MIB do instead of a trial, but turning evidence against the actual Big Bad is how guys in your position avoid things like being locked up forever, or losing your home.